Tools
Cell Engineering
-
SinCMat
Single-cell based method for predicting functional maturation transcription factors.
-
SeeSawPred
Web application for predicting cell-fate determinants in binary cell differentiation.
-
TransSinW
Single-cell RNA-seq based web application to guide cell conversion experiments.
-
IRENE
Computer-guided design tool for efficient cellular conversion using multi-OMIC data.
General Tools
-
ChemPert
Web and database to predict transcriptional responses of non-cancer cells to various perturbagens
-
SigHotSpotter
Web application for identifying signaling molecules by integrating signaling and transcriptional networks
-
InterCom
Mechanistic computational model integrating extracellular binding events with intracellular signaling cascades.
-
GRNOptR
Gene Regulatory Network Inference tool using booleanized transcriptomic data and Prior Knowledge Networks.
Ageing and Rejuvenation
-
SINGULAR
Cell rejuvenation atlas providing unified system biology analysis of diverse rejuvenation strategies across multiple organs at single-cell resolution.
-
MultiTIMER
Multi-tissue aging clock measuring biological age of cells from their transcriptional profiles by evaluating key cellular processes.
All images were created using BioRender.com