{"id":13,"date":"2018-01-29T15:21:28","date_gmt":"2018-01-29T15:21:28","guid":{"rendered":"https:\/\/website.prod.unilu.spikeseed.cloud\/fstm-fr\/news\/a-toolbox-for-probabilistic-boolean-networks\/"},"modified":"2018-01-29T15:21:28","modified_gmt":"2018-01-29T15:21:28","slug":"a-toolbox-for-probabilistic-boolean-networks","status":"publish","type":"news","link":"https:\/\/www.uni.lu\/fstm-fr\/news\/a-toolbox-for-probabilistic-boolean-networks\/","title":{"rendered":"A Toolbox for Probabilistic Boolean Networks"},"content":{"rendered":"<section class=\"wp-block-unilux-blocks-free-section section\"><div class=\"container xl:max-w-screen-xl\"><p>During the 16th Asia Pacific Bioinformatics Conference (APBC), which occurred on 15-17 January 2018 in Japan, computer scientists Andrzej Mizera from the Luxembourg Institute of Health (LIH) and the Luxembourg Centre for Systems Biomedicine (LCSB), together with Jun Pang and Qixia Yuan from the Computer Science and Communications Research Unit (CSC) at University of Luxembourg won the Best Poster Award. Entitled \u00ab\u00a0ASSA\u2010PBN: a software tool for large probabilistic Boolean networks\u00a0\u00bb, the poster presents a software tool for analysing biological systems.<\/p><figure class=\"wp-block-dev4-reusable-blocks-image  object-fit--contain\">\n    \n<img decoding=\"async\" class=\"wp-block-image unilux-custom-image-block\"\n                alt=\"\"\n            src=\"https:\/\/www.uni.lu\/wp-content\/uploads\/sites\/20\/2023\/07\/best_poster_award.jpg\"\n                srcset=\"https:\/\/www.uni.lu\/wp-content\/uploads\/sites\/20\/2023\/07\/best_poster_award-300x209.jpg 300w, https:\/\/www.uni.lu\/wp-content\/uploads\/sites\/20\/2023\/07\/best_poster_award.jpg 500w\"\n                style=\"object-position: 50.00% 50.00%; font-family: &quot;object-fit: contain; object-position: 50.00% 50.00%;&quot;; aspect-ratio: 3\/2; object-fit: contain; width: 100%;\"\n        loading=\"lazy\"\n\/>    <\/figure><p>Bridging the gap between computer science and biology is a key challenge for our researchers. This year, the Asia Pacific Bioinformatics Conference (<a href=\"http:\/\/apbc2018.bio.keio.ac.jp\/\" target=\"_blank\" title=\"\" rel=\"noopener\">APBC 2018<\/a>) gathered researchers, academics, and industrial practitioners to exchange about the latest developments in the fields of <a href=\"https:\/\/www.lih.lu\/\" target=\"_blank\" title=\"\" rel=\"noopener\">LIH<\/a> and <a href=\"https:\/\/wwwfr.uni.lu\/lcsb\" target=\"_blank\" title=\"\" rel=\"noopener\">LCSB<\/a>. It was a great opportunity for Andrzej\u00a0Mizera from the Luxembourg Institute of Health (<a href=\"https:\/\/wwwfr.uni.lu\/snt\/people\/jun_pang\" target=\"_self\" title=\"\" rel=\"noopener\">Jun Pang<\/a>) and the Luxembourg Centre for Systems Biomedicine (<a href=\"https:\/\/wwwfr.uni.lu\/recherche\/fstm\/dcs\/members\/qixia_yuan\" target=\"_self\" title=\"\" rel=\"noopener\">Qixia Yuan<\/a>) together with\u00a0<a href=\"https:\/\/wwwen.uni.lu\/research\/fstc\/computer_science_and_communications_research_unit\/members\/pascal_bouvry\" target=\"_self\" title=\"\" rel=\"noopener\">CSC<\/a> and <strong>bioinformatics<\/strong>\u00a0from the\u00a0Computer Science and Communications Research Unit (<strong>computational biology<\/strong>) to highlight their work on computational methods for analysing large biological networks.<\/p><figure class=\"wp-block-dev4-reusable-blocks-image  object-fit--contain\">\n    \n<img decoding=\"async\" class=\"wp-block-image unilux-custom-image-block\"\n                alt=\"\"\n            src=\"https:\/\/www.uni.lu\/wp-content\/uploads\/sites\/20\/2023\/07\/assa_pbn.jpg\"\n                srcset=\"https:\/\/www.uni.lu\/wp-content\/uploads\/sites\/20\/2023\/07\/assa_pbn-300x211.jpg 300w, https:\/\/www.uni.lu\/wp-content\/uploads\/sites\/20\/2023\/07\/assa_pbn.jpg 500w\"\n                style=\"object-position: 50.00% 50.00%; font-family: &quot;object-fit: contain; object-position: 50.00% 50.00%;&quot;; aspect-ratio: 3\/2; object-fit: contain; width: 100%;\"\n        loading=\"lazy\"\n\/>    <\/figure><p>Qixia Yuan gives an overview of his research activities.<\/p><p><strong>As a computer scientist, how did you become interested in biology?<\/strong><\/p><p>I came across biology during my master study when my current supervisor Dr. Jun Pang introduced me his project related to systems biology. To me, analysing a biological system is like playing a computer game. Exploring the system is just like trying different ways to complete the mission in the game. It makes me so excited when I can complete the mission with knowledge from computer science in which I have been spending my time and energy since my bachelor study.\u00a0<\/p><p><strong>What is ASSA-PBN about?<\/strong><\/p><p>ASSA-PBN is a software tool for modelling, simulation and analysis of biological systems described as probabilistic Boolean networks (PBNs). It is specially designed for large PBNs, which naturally arise in the domain of systems biology. It is quite useful for biologists to analyse the long-run behaviours of biological systems, e.g., which gene in our body is crucial for the occurrence of cancer.\u00a0<\/p><p><strong>What does this award mean to you?<\/strong><\/p><p>Doing research in an interdisciplinary field is sometimes dangerous as the work you do may be useless when you are not a real expert in one of the fields. This award shows the recognition of our team\u2019s work from the peer researchers of both biologists and computer scientists. It shows that we are in the right direction and it encourages me to continue my research work.<\/p><\/div><\/section>","protected":false},"excerpt":{"rendered":"<p>During the 16th Asia Pacific Bioinformatics Conference (APBC), which occurred on 15-17 January 2018 in Japan, computer scientists Andrzej Mizera from the Luxembourg Institute of Health (LIH) and the Luxembourg Centre for Systems Biomedicine (LCSB), together with Jun Pang and Qixia Yuan from the Computer Science and Communications Research Unit (CSC) at University of Luxembourg won the Best Poster Award. Entitled \u00ab\u00a0ASSA\u2010PBN: a software tool for large probabilistic Boolean networks\u00a0\u00bb, the poster presents a software tool for analysing biological systems.<\/p>\n","protected":false},"author":0,"featured_media":14,"template":"","format":"standard","meta":{"featured_image_focal_point":[],"show_featured_caption":false,"ulux_newsletter_groups":"","uluxPostTitle":"","uluxPrePostTitle":"","_trash_the_other_posts":false,"_price":"","_stock":"","_tribe_ticket_header":"","_tribe_default_ticket_provider":"","_tribe_ticket_capacity":"0","_ticket_start_date":"","_ticket_end_date":"","_tribe_ticket_show_description":"","_tribe_ticket_show_not_going":false,"_tribe_ticket_use_global_stock":"","_tribe_ticket_global_stock_level":"","_global_stock_mode":"","_global_stock_cap":"","_tribe_rsvp_for_event":"","_tribe_ticket_going_count":"","_tribe_ticket_not_going_count":"","_tribe_tickets_list":"[]","_tribe_ticket_has_attendee_info_fields":false},"news-category":[],"news-topic":[],"organisation":[24],"authorship":[],"acf":[],"yoast_head":"<!-- This site is optimized with the Yoast SEO Premium plugin v22.3 (Yoast SEO v22.3) - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>A Toolbox for Probabilistic Boolean Networks - FSTM actualit\u00e9s I Universit\u00e9 du Luxembourg<\/title>\n<meta name=\"description\" content=\"During the 16th Asia Pacific Bioinformatics Conference (APBC), which occurred on 15-17 January 2018 in Japan, computer scientists Andrzej Mizera from the Luxembourg Institute of Health (LIH) and the Luxembourg Centre for Systems Biomedicine (LCSB), together with Jun Pang and Qixia Yuan from the Computer Science and Communications Research Unit (CSC) at University of Luxembourg won the Best Poster Award. Entitled &quot;ASSA\u2010PBN: a software tool for large probabilistic Boolean networks&quot;, the poster presents a software tool for analysing biological systems.\" \/>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.uni.lu\/fstm-fr\/news\/a-toolbox-for-probabilistic-boolean-networks\/\" \/>\n<meta property=\"og:locale\" content=\"fr_FR\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"A Toolbox for Probabilistic Boolean Networks\" \/>\n<meta property=\"og:description\" content=\"During the 16th Asia Pacific Bioinformatics Conference (APBC), which occurred on 15-17 January 2018 in Japan, computer scientists Andrzej Mizera from the Luxembourg Institute of Health (LIH) and the Luxembourg Centre for Systems Biomedicine (LCSB), together with Jun Pang and Qixia Yuan from the Computer Science and Communications Research Unit (CSC) at University of Luxembourg won the Best Poster Award. Entitled &quot;ASSA\u2010PBN: a software tool for large probabilistic Boolean networks&quot;, the poster presents a software tool for analysing biological systems.\" \/>\n<meta property=\"og:url\" content=\"https:\/\/www.uni.lu\/fstm-fr\/news\/a-toolbox-for-probabilistic-boolean-networks\/\" \/>\n<meta property=\"og:site_name\" content=\"FSTM FR\" \/>\n<meta property=\"article:publisher\" content=\"https:\/\/www.facebook.com\/fstm.uni.lu\/\" \/>\n<meta property=\"og:image\" content=\"https:\/\/www.uni.lu\/wp-content\/uploads\/sites\/20\/2018\/01\/a_toolbox_for_probabilistic_boolean_networks.jpg\" \/>\n\t<meta property=\"og:image:width\" content=\"800\" \/>\n\t<meta property=\"og:image:height\" content=\"600\" \/>\n\t<meta property=\"og:image:type\" content=\"image\/jpeg\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Dur\u00e9e de lecture estim\u00e9e\" \/>\n\t<meta name=\"twitter:data1\" content=\"2 minutes\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"NewsArticle\",\"@id\":\"https:\/\/www.uni.lu\/fstm-fr\/news\/a-toolbox-for-probabilistic-boolean-networks\/#article\",\"isPartOf\":{\"@id\":\"https:\/\/www.uni.lu\/fstm-fr\/news\/a-toolbox-for-probabilistic-boolean-networks\/\"},\"author\":{\"name\":\"\",\"@id\":\"\"},\"headline\":\"A Toolbox for Probabilistic Boolean Networks\",\"datePublished\":\"2018-01-29T15:21:28+00:00\",\"dateModified\":\"2018-01-29T15:21:28+00:00\",\"mainEntityOfPage\":{\"@id\":\"https:\/\/www.uni.lu\/fstm-fr\/news\/a-toolbox-for-probabilistic-boolean-networks\/\"},\"wordCount\":422,\"publisher\":{\"@id\":\"https:\/\/www.uni.lu\/fstm-fr\/#organization\"},\"image\":{\"@id\":\"https:\/\/www.uni.lu\/fstm-fr\/news\/a-toolbox-for-probabilistic-boolean-networks\/#primaryimage\"},\"thumbnailUrl\":\"https:\/\/www.uni.lu\/wp-content\/uploads\/sites\/20\/2018\/01\/a_toolbox_for_probabilistic_boolean_networks.jpg\",\"inLanguage\":\"fr-FR\"},{\"@type\":\"WebPage\",\"@id\":\"https:\/\/www.uni.lu\/fstm-fr\/news\/a-toolbox-for-probabilistic-boolean-networks\/\",\"url\":\"https:\/\/www.uni.lu\/fstm-fr\/news\/a-toolbox-for-probabilistic-boolean-networks\/\",\"name\":\"A Toolbox for Probabilistic Boolean Networks - FSTM actualit\u00e9s I Universit\u00e9 du Luxembourg\",\"isPartOf\":{\"@id\":\"https:\/\/www.uni.lu\/fstm-fr\/#website\"},\"primaryImageOfPage\":{\"@id\":\"https:\/\/www.uni.lu\/fstm-fr\/news\/a-toolbox-for-probabilistic-boolean-networks\/#primaryimage\"},\"image\":{\"@id\":\"https:\/\/www.uni.lu\/fstm-fr\/news\/a-toolbox-for-probabilistic-boolean-networks\/#primaryimage\"},\"thumbnailUrl\":\"https:\/\/www.uni.lu\/wp-content\/uploads\/sites\/20\/2018\/01\/a_toolbox_for_probabilistic_boolean_networks.jpg\",\"datePublished\":\"2018-01-29T15:21:28+00:00\",\"dateModified\":\"2018-01-29T15:21:28+00:00\",\"description\":\"During the 16th Asia Pacific Bioinformatics Conference (APBC), which occurred on 15-17 January 2018 in Japan, computer scientists Andrzej Mizera from the Luxembourg Institute of Health (LIH) and the Luxembourg Centre for Systems Biomedicine (LCSB), together with Jun Pang and Qixia Yuan from the Computer Science and Communications Research Unit (CSC) at University of Luxembourg won the Best Poster Award. 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